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hifi contigs  (BioNano Genomics)

 
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    BioNano Genomics hifi contigs
    Hifi Contigs, supplied by BioNano Genomics, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/hifi+contigs/pm40428358-123-5-16?v=BioNano+Genomics
    Average 90 stars, based on 1 article reviews
    hifi contigs - by Bioz Stars, 2026-07
    90/100 stars

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    Plastome and Mitochondrial genome maps of Persea americana cultivar Hass . A) Chloroplast genome and annotation. The SSC subunit of the plastome was found to occur in both orientations giving rise to two distinct chloroplast sequences. Genes present outside the outer track are transcribed clockwise and the ones present inside are transcribed anti-clockwise. Genes belonging to different functional groups are colour-coded. B) Mitochondrial <t>contigs</t> and annotation. The sizes of contigs are indicated under each contig. As plant mitochondrial genomes generally exist in small circular and branched form, the annotation was represented on circular contigs. The annotations correspond to identified tRNA sites on the mitochondrial contigs.
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    Plastome and Mitochondrial genome maps of Persea americana cultivar Hass . A) Chloroplast genome and annotation. The SSC subunit of the plastome was found to occur in both orientations giving rise to two distinct chloroplast sequences. Genes present outside the outer track are transcribed clockwise and the ones present inside are transcribed anti-clockwise. Genes belonging to different functional groups are colour-coded. B) Mitochondrial contigs and annotation. The sizes of contigs are indicated under each contig. As plant mitochondrial genomes generally exist in small circular and branched form, the annotation was represented on circular contigs. The annotations correspond to identified tRNA sites on the mitochondrial contigs.

    Journal: Horticulture Research

    Article Title: A haplotype resolved chromosomal level avocado genome allows analysis of novel avocado genes

    doi: 10.1093/hr/uhac157

    Figure Lengend Snippet: Plastome and Mitochondrial genome maps of Persea americana cultivar Hass . A) Chloroplast genome and annotation. The SSC subunit of the plastome was found to occur in both orientations giving rise to two distinct chloroplast sequences. Genes present outside the outer track are transcribed clockwise and the ones present inside are transcribed anti-clockwise. Genes belonging to different functional groups are colour-coded. B) Mitochondrial contigs and annotation. The sizes of contigs are indicated under each contig. As plant mitochondrial genomes generally exist in small circular and branched form, the annotation was represented on circular contigs. The annotations correspond to identified tRNA sites on the mitochondrial contigs.

    Article Snippet: The DNA contigs produced from Pacific Biosciences HiFi reads were further assembled using a previously published version of the genome supported by a genetic map.

    Techniques: Functional Assay

    Pseudo-molecule assembly statistics. This table indicates chromosome-wise statistics of the assembled genome

    Journal: Horticulture Research

    Article Title: A haplotype resolved chromosomal level avocado genome allows analysis of novel avocado genes

    doi: 10.1093/hr/uhac157

    Figure Lengend Snippet: Pseudo-molecule assembly statistics. This table indicates chromosome-wise statistics of the assembled genome

    Article Snippet: The DNA contigs produced from Pacific Biosciences HiFi reads were further assembled using a previously published version of the genome supported by a genetic map.

    Techniques: